HORDB

ID: hor003440
Uniprot ID: A0A3R7LVP7
Protein name: Orcokinin
Gene name: NA
Organism: Penaeus vannamei (Whiteleg shrimp) (Litopenaeus vannamei)
Family: Orcokinin family
Source: Animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Penaeus (genus), Penaeidae (family), Penaeoidea (superfamily), Dendrobranchiata (suborder), Decapoda (order), Eucarida (superorder), Eumalacostraca (subclass), Malacostraca (class), Multicrustacea (superclass), Crustacea (subphylum), Pancrustacea, Mandibulata, Arthropoda (phylum), Panarthropoda, Ecdysozoa, Protostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: GO:0005184 neuropeptide hormone activity
GO BP: GO:0007165 signal transduction
GO CC: NA

Sequence: NFDEIDRA
Length: 8(7-14)
Propeptide: MGFAKRNFDEIDRAGMGFAKRNFDEIDRAGMGFAKRNFDEIDRAGMGFAKRNFDEIDRAGMGFAKRNFDEIDRAGMGFAKRNFDEIDRAGFGFLKRAFMPRSNLFKRNFDEIDRAGFGFNRRSSN
Signal peptide: NA
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor003440_AF2.pdb

hor003440_ESM.pdb

Mass:	110406	Formula:	C41H62N12O16
Absent amino acids:	CGHKLMPQSTVWY	Common amino acids:	D
pI:	3.88	Basic residues:	1
Polar residues:	1	Hydrophobic residues:	3
Hydrophobicity:	-117.5	Boman Index:	-3610
Half-Life / Aliphatic Index:	1.4 hour	Aliphatic Index:	61.25
Instability Index:	2003.75	Extinction Coefficient cystines:	0
Absorbance 280nm:	0

PubMed ID: 19852991
Title: Combining in Silico Transcriptome Mining and Biological Mass Spectrometry for Neuropeptide Discovery in the Pacific White Shrimp Litopenaeus Vannamei